Function reference • camtrapviz

Read and format data

read_data(): Read data

cast_columns(): Cast columns types

clean_data(): Clean data

filter_cameras_in_both_tables(): Filter cameras in both tables

filter_data(): Filter camera trap data

remove_rows_with_NA(): Remove rows with NA

Summarize and explore data

get_cameras(): Get unique cameras vector

get_cameras_not_in(): Get non-shared cameras between two dataframes

get_nspecies(): Get species count from a dataframe

get_all_species(): Get species from a dataframe

get_unique_species(): Get unique species from a dataframe

get_diversity_indices(): Get diversity indices

summarize_cameras(): Summarize cameras

summarize_species(): Summarize species

Plot data

plot_activity(): Plot activity data

plot_diversity(): Plot species diversity at cameras

plot_map(): Plot cameras map

plot_points(): Plot species occurrences at cameras

plot_species_bars(): Barplot of species abundance

Run Shiny app

run_camtrapviz(): Run Shiny app